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双语推荐:微RNA

成功建立了在空间重力条件下水稻细胞的培养体系,并在“ 神舟八号” 飞船空间飞行时的重力条件下对培养过程中的细胞进行了实时固定,保存了水稻细胞中反映重力条件下基因表达状态的RNA 样品.返地后,用RNA 质量检测和表达谱芯片方法对回收样品进行了分析.提取的水稻细胞RNA 质量检测合格,表明本次空间的实验和固定方法可行和可靠.进-步分析水稻表达谱变化情况显示,重力条件下水稻细胞的表达谱相比地面重力条件和重力条件下人工1 g 条件下的对照有显著差异.
Culture system of rice cells under spatial microgravity conditions was successfully estab-lished in this study .Moreover , a real-time fixation of cultured cells was undertaken to get the RNA samples which reflected the gene expression pattern of rice cells under microgravity conditions .After Shenzhou 8 spaceship returned to earth , collected samples were analyzed by RNA quality-test and micro-array analysis .The results of RNA quality-test indicated that the experimental and fixation methods in space were feasible and reliable .Furthermore, analysis of gene expression changes showed that the pattern of gene expression in rice cells under microgravity was significantly different as compared with ground gravity conditions and artificial 1 g conditions .
非编码RNA(non-coding RNA,ncRNA)是指除mRNA、tRNA和rRNA以外,不编码蛋白质的RNA。近年研究显示,ncRNA在细菌、真菌和哺乳动物等多种生物体的活动中可作为癌基因或抑癌基因,对肿瘤的发生、发展发挥调控作用。此外,ncRNA有希望成为肿瘤诊断的新型标志物。本文介绍了一些与甲状腺肿瘤相关的ncRNA最新研究进展,并着重讨论微RNA(miRNA)及长链非编码RNA(lncRNA)在甲状腺肿瘤发生、转移中的作用。
Non-coding RNAs (ncRNAs) refers to non protein coding RNA, including mRNA, tRNA and rRNA. Recent studies showed that ncRNA can act as oncogenes or tumor suppressor gene in bacteria, fungi and mammals. It plays a regulatory role in occurrence, development of tumors. In addition, ncRNA is becoming a new marker for diagnosis of tumors. This review introduces some latest research progress of ncRNA associated with thyroid cancer. We emphatically discuss the role of miRNA and lncRNA in thyroid tumorigenesis and metastasis.

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人类基因组中蛋白质非编码基因占大多数,这些非编码基因与癌症的发生、发展有密切联系。非编码基因转录形成的 RNA 称作非编码 RNA。其中的长链非编码 RNA(long non-coding RNA,lncRNA)具有重要的基因调控功能并由此受到重视。由于部分 lncRNA 在各类型的癌症中表达异常,因此可以作为癌症的标志物用以诊断癌症。本文对 lncRNA 的分类、基因调控机制以及在癌症中的作用进行介绍,并对现有的以及部分潜在的癌症标志物lncRNA进行详细阐述。随着基因测序技术及阵列技术的发展,更多的 lncRNA 会被发现并且能够成为重要的诊断肿瘤的标志物。
[Large numbers of the genomic transcripts do not encode proteins but play critical role in development and progress of cancer.Those non-coding transcripts are called non-coding RNA.Among the non-coding RNA, the long non-coding RNA (lncRNA) are increasingly recog-nized as participators of gene regulation.Parts of the lncRNA are found to be dysregulated in cancer and believed to be potential biomarkers for cancer diagnosis .In this paper, the classification, regu-lation mechanisms and biological functions of the lncRNA are introduced.Besides, some existing and potential biomarker lncRNA are also elaborated here.More lncRNA will be investigated and be-come the significant biomarkers for cancer diagnosis with the advancement of gene sequence and mi-croarray technologies.

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目的 探讨HBV相关性肝细胞癌患者血清微RNA-574-3p的表达水平及其辅助诊断的价值.方法 纳入90例HBV相关性肝细胞癌患者、40例HBV相关性肝硬化患者和50名健康对照者.检测所有受试者血清标本中微RNA-574-3p的表达水平、AFP和α-L-岩藻糖苷酶(AFU)的含量.比较不同组间血清微RNA-574-3p水平的差异,分析肝细胞癌患者血清微RNA-574-3p水平与其临床病理特征之间的关系,均采用t检验.采用Spearman相关性分析肝细胞癌患者血清微RNA-574-3p水平与AFP,AFU的关系,应用ROC曲线及AUC(95%CI)评估它们作为诊断指标的诊断效能.结果 肝细胞癌组、肝硬化组与健康对照组血清微RNA-574-3p的相对表达量分别为2.152(1.654,3.061)、1.292(0.984,1.666)和1.018(0.750,1.726).肝细胞癌患者血清微RNA-574-3p表达量高于肝硬化患者和健康对照者,差异均有统计学意义(t=2.726,2.845;P均<0.01).肝细胞癌患者血清微RNA-574-3p相对表达量在不同的分化程度(t=2.262,P=0.039)、肿瘤分期(t=2.354,P=0.025)和HBVDNA含量(t=2.771,P<0.01)间差异均有统计学意义.肝细胞癌患者血清微RNA-574-3p相对表达量与AFP,AFU之间无相关性(r2=0.076,P=0.505;r2=0.082,P=0.422).肝细胞癌组与肝硬化组比较,血清微RNA-574-3p
Objective To explore the expression and diagnostic value of serum microRNA-574-3p (miR-574-3p) in hepatitis B virus (HBV)-related hepatocellular carcinoma (HCC).Methods A total of 90 patients with HBV-related HCC,40 patients with HBV-related liver cirrhosis (LC) and 50 healthy controls were recruited.The expression levels of serum miR-574-3p,α-fetoprotein (AFP) and α-Lfucosidase (AFU) of all subjects were determined.The difference of serum miR-574-3p level between groups was compared.The relation between serum miR-574-3p level of HCC patients and its clinical pathological characteristics was analyzed.The t-test was performed.The relationship between serum miR-574-3p level of HCC patients and AFP,AFU was analyzed by Spearman correlation analysis.The diagnostic efficacy of them as diagnostic markers was evaluated by receiver operating characteristic curves (ROC) and the area under the curve (AUC)(95% CI (confidence interval)).Results The relative quantity expression of serum

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目的研究肌成束蛋白-1(Fascin-1)表达对肝癌细胞HepG2增殖能力和骨架结构的影响。方法采用RNA干扰技术抑制HepG2中Fascin-1表达;噻唑蓝(MTT)法检测细胞增殖;免疫荧光法检测Fascin-1表达下调后肌动蛋白丝的改变。结果 RNA干扰可有效抑制HepG2中Fascin-1表达。Fascin-1蛋白表达下调可抑制细胞增殖,同时引起细胞丝排列紊乱、断裂、网状结构消失呈絮状,部分细胞收缩。结论 Fascin-1下调引起的肌动蛋白丝的破坏,一方面可能导致了癌细胞增殖抑制,另一方面可能通过影响细胞运动能力而降低细胞的迁移侵袭能力。
Objective To investigate the influence of the expression of Fascin-1 on proliferation and cy-toskeleton of hepatocarcinoma cell line HepG2 .Methods RNA interference (RNAi) was used to inhibit Fascin-1 expression in HepG2 .Cell proliferation was determined by M TT .In addition ,the F-actin of cells was observed with fluorescence microscope .Results Fascin-1 down-regulation could inhibit cells proliferation . HepG2 cy-toskeleton was disorganized as well .Conclusion Expression of Fascin-1 might contribute to the cells prolifera-tions of HepG2 ,which might be related to the cytoskeleton alterations .

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mapk-like是一种信号转导相关促有丝分裂激活蛋白激酶家族基因,与线虫(Caenorhabditis elegans)中参与抵御Cry毒素的p38 MAPK含有类似的模序,其是否参与埃及伊蚊(Aedes aegypti)抵御苏云金芽胞杆菌(Bacillus thuringiensis,Bt)过程有待验证。为简便并大量获得RNAi验证所需的ds RNA,本研究利用RNaseⅢ缺陷型大肠杆菌(Escherichia coli)HT115高效和廉价的优点,根据已测序的促有丝分裂激活蛋白激酶家族基因mapk-like基因序列,设计特异性引物,PCR扩增大小为361 bp的目的片段mapk-like(Gen Bank登录号:AAEL003728-RA),将其连接到克隆载体p MD18-T上,利用限制性内切酶XbaⅠ和XhoⅠ将其插入到原核表达载体p Litmus28i的2个T7启动子之间,成功构建可诱导形成目的双链RNA(ds RNA)的原核表达重组载体p Litmus28i-mapk-like,并转化大肠杆菌HT115,经IPTG诱导,1 m L菌液的ds RNA产量可达1.18μg,电泳检测条带清晰,质量良好。此外,利用壳聚糖包裹ds RNA形成纳米粒,上清经电泳检测表明,壳聚糖的聚沉效率良好,纳米球可有效防止ds RNA从饲料琼脂块中游离出来,提高ds RNA的稳定性。埃及伊蚊幼虫摄取mapk-like基因的ds RNA后,相对转录表达水平为65.55%,表达量明显下调,饲喂效果良好。
Mapk-like, the signaling transduction related mitogen-activated protein kinase gene, shares aconserve motif with p38 MAPK that involves in cellular defense of Caenorhabditis elegans against Bacillus thuringiensis(Bt) Cry toxins. Little validation work, however, had been done in its important role for defense response of Aedes aegypti to Cry toxins. Therefore, RNaseⅢ-absent Escherichia coli HT115, with the high-efficiency and low-cost, was applied to establish a convenient and economical method for mass production of dsRNA for RNA silencing. Using specific primers, mapk-like gene (GenBank No. AAEL003728-RA) was amplified. Then 361 bp PCR products were cloned into the cloning vector pMD18-T and subcloned into the expression vector pLitmus28i, which contained 2 T7 promoters located in each side of multiple cloning sites with the digestion of restriction endonuclease XbaⅠ/XhoⅠ. The recombinant plasmid pLitmus28i-mapk-like was transformed into the HT115. dsRNAs of 1.18 μg/mL o

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人乳含有丰富均衡的营养成分.近年研究证实人乳不仅含丰富的营养素,亦存在具有重要调节作用的RNA(miRNA).miRNA是长约21~25个核苷酸长度的非编码的小RNA,其在生物体的增殖、发育、分化、凋亡、应激、脂质代谢及肿瘤发生发展等进程中起重要的调节作用.人乳中的miRNA主要以泡形式存在,其中let-7、miRNA-30b及miRNA-378等含量丰富,这些miRNA参与脂肪细胞分化、脂质积聚和糖脂代谢调控.
Human breast milk contains a good balance of nutrients.In recent years,researchers have found that it contains not only abundant nutrients,but also different active components,and MicroRNAs (miRNA) are included.MiRNA are endogenous non-coding RNA,consisting of 21 to 25 nucleotides in length.They play an important role in regulating a variety of biological processes.In the miRNA confirmed in human breast milk,let-7、miRNA-30b and miRNA-378 are highly expressed and researches have already demonstrated that these miRNA are participating in the regulation of adipocytes differentiation,lipid accumulation and sugar and lipid metabolism.

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【目的】克隆蓝叶虫孢子虫RPB1(RNA聚合酶II大亚基)基因片段,对其基因及编码的蛋白序列特征进行生物信息学分析,进一步明确蓝叶虫孢子虫的分类学地位,为深入探究RPB1基因编码蛋白的具体生物学功能奠定基础。【方法】根据家蚕孢子虫RPB1基因序列,采用Primer Premier 5.0软件设计6对同源引物,利用PCR技术克隆蓝叶虫孢子虫RPB1基因片段;通过GSDS、SMART、DNAstar、MEGA4.1等生物信息学分析软件对蓝叶虫孢子虫RPB1基因片段进行系统发育分析。【结果】克隆得到了蓝叶虫孢子虫RPB1基因片段序列,在Gen Bank登录号为KJ728831。该基因片段的长度为2 933 bp,包含一个长为2 922 bp的开放读码框,预测编码的蛋白质由974个氨基酸组成,蛋白分子量为109.38 k D,等电点为7.087。蓝叶虫孢子虫RPB1基因片段结构为单外显子结构,编码的蛋白含有4个结构域:RPOLA_N、RNA_pol_Rpb1_4、RNA_pol_Rpb1_5和RNA_pol_Rpb1_6。其中,RPOLA_N结构域在原核和真核生物中都是非常重要的结构域。该蛋白质的二级结构主要由4种形式组成:α螺旋、无规则卷曲、延伸链和β转角。α-螺旋和无规则卷曲所占比例相当高,延伸链主要位于α-螺旋和无规则卷曲之间。N-末端以α-螺旋的形式存在。多序列比对
[Objective] The objective of this study is to clarify the taxonomic status of Nosema sp. PA and provide a new foundation for the further study of its biological function by cloning the RPB1 (largest subunit of RNA polymeraseII) gene of Nosema sp. PA and analyzing the gene sequence by bioinformatics methods.[Method]Six pairs of homologous primers were designed by Primer Premier 5.0 software for the RPB1 gene of Nosema sp. PA based on the RPB1 gene of Nosema bombycis. Partial sequence of the RPB1 gene of Nosema sp. PA was cloned by PCR amplification. Then, bioinformatics analysis on the RPB1 gene of Nosema sp. PA and its encoding protein were conducted by bio-softs as GSDS, SMART, DNAstar and MEGA4.1. [Result] Partial sequence of the RPB1gene of Nosema sp. PA was cloned by PCR amplification (GenBank accession number KJ728831). The partial sequence of the RPB1 gene of Nosema sp. PA had 2 933 nucleotides which contained an ORF with 2 922 bp encoding a polypeptide of 974 amino aci

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背景:肥胖导致了包括高血压、冠心病、脂肪肝、高脂血症、2型糖尿病在内的诸多疾病,因此深入理解脂肪细胞分化机制对于肥胖的防治具有深远意义。目前对于脂向分化机制的研究多集中在RNA上,对于长非编码RNA在脂向分化过程中的作用尚且知之甚少。目的:获得脂向分化过程中差异倍数明显的长非编码RNA,并进一步筛选在脂向分化过程中可能发挥重要作用的长非编码RNA进行验证。方法:取人腹部皮下脂肪,采用组织块培养法获取脂肪干细胞,传至第3代后进行成脂诱导分化,通过阵列技术对脂向分化过程中0,5,12 d长非编码RNA及mRNA差异性表达量进行统计,并结合生物信息学报告筛选出呈现明显差异性表达的长非编码RNA,通过qRT-PCR进行验证。结果与结论:脂向分化过程中以差异倍数1.5(P <0.05)为标准,上调长非编码RNA的数量5 d vs.0 d 748个,12 d vs.0 d 847个,12 d vs.5 d 593个;下调长非编码RNA的数量5 d vs.0 d 828个,12 d vs.0 d 1113个,12 d vs.5 d 750个;结合生物信息学分析结果,在与脂类代谢有关的28个长非编码RNA中根据诱导0,5,12 d 差异表达倍数较高且其靶基因可能是已知的与成脂相关的基因中,筛选出3个长非编码 RNA:AK304548、BP216319、DA852857。通过PCR验证结果显示AK304548、BP216319及其靶基因表达量呈现先下调后上调的趋势,与阵列测序结果相符,预示其在脂向分化过程中起到调控作用。
BACKGROUND:The obesity has led to a plenty of diseases including hypertension, coronary heart disease, fatty liver, hyperlipidemia, and type 2 diabetes. Therefore, understanding the mechanism of adipocyte differentiation is of far-reaching significance to the prevention and treatment of obesity. For the current studies of the mechanism of adipocyte differentiation pay more attention to microRNA, rather than long non-coding RNAs (lncRNAs). OBJECTIVE:To obtain the lncRNAs whose fold change was apparent during adipogenic differentiation, and to further screen the lncRNAs that possibly play a crucial role in adipogenic differentiation for verification. METHODS:Subcutaneous fat was obtained from human abdomen. Adipose-derived stem cells were col ected using tissue culture method. The third passage of adipose-derived stem cells was used for adipogenic differentiation. Through microarray technology, the expression levels of lncRNAs and mRNA were analyzed at 0, 5 and 12 days in adipogenic diff
目的 探讨信号传导及转录激活因子3 (signal transducers and activators of transcription,STAT-3)调控微RNA-21影响人舌鳞状细胞癌侵袭能力的效果和机制.方法 实验共分3大组:空白对照组、二甲基亚砜组(DMSO组)、小分子抑制剂组(WP1066组).采用STAT-3小分子抑制剂WP1066下调STAT-3表达;甲基噻唑基四唑(methyl thiazolyl tetrazolium,MTT)法测定Tscca和Tca8113P160舌癌细胞WP1066的半数抑制浓度(inhibitory concentration,IC5o);蛋白质印迹法检测WP1066处理后舌癌细胞STAT-3及pSTAT-3表达;实时定量PCR法检测微RNA-21表达水平;用Matrigel基质生长实验和Transwell体外侵袭实验检测肿瘤细胞生长形成球形克隆、侵袭能力;蛋白质印迹法检测肿瘤细胞侵袭相关蛋白表达.荧光素酶报告基因实验验证STAT-3与微RNA-21调控关系.结果 MTT法结果:Tscca、Tca8113P160细胞WP1066的IC50分别为3.1和3.5 μmol/L;WP1066组STAT-3及pSTAT-3表达水平低于空白对照组;WP1066组微RNA-21表达水平低于空白对照组.WP1066组细胞生长形成球形克隆能力减弱,直径减小(Tscca:F=15.751,P=0.004;Tca8113P160:F=12.964,P=0.007);通过Transwell小室聚碳酸酯膜的细胞数少于空白对照组(Tscca:F=1688.926,P=0.000;Tca8113 P160:F=327.528,P=0.000);基质金属蛋白酶2/9蛋白表达水平下调;金属蛋白酶抑制剂蛋白表达水平上调.荧光素酶报告基因实验证明微RNA-21是STAT-3的调控靶点.结论 抑制舌癌细胞中STAT-3活性可以下调微RNA-21表达并降低舌癌细胞的侵袭能力;为进一步探究STAT-3参与调控舌癌细胞侵袭转移能力的分子机制提供实验依据.
Objective To investigate the effect and mechanism of signal transducers and activators of transcription 3 (STAT-3) modulates human tongue squamous cell carcinoma invasion ability via targeting mircoRNA-21.Methods Tscca and Tca8113P160 human tongue squamous cell carcinoma cell lines were used.WP1066(STAT-3 inhibitor),the small molecule inhibitor of STAT-3 was used to suppress the STAT-3 expression.The half maximal inhibitory concentration (ICs0 value) of WP1066 in the two cell lines was determined by methyl thiazolyl tetrazolium(MTT) assay.The expression level of STAT-3 and phosphorylation of STAT-3 (pSTAT-3) was examined by Western blotting.Real-time PCR was used to detect the mircoRNA-21 expression after treated with WP1066.Matrigel matrix and transwell assay were used to determine cancer cell colony formation and invasion ability after treated with WP1066.Tumor invasion related proteins in Tscca and Tca8113P160 cell lines were measured by Western blotting.Luciferase reporter gene ass

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